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rs73129825 chr2:236513197 G>C

Sequence
ggggaggatgcaatgcttcctgct[G/C]ccaccttctcacccaaggacccag
ASB in cell types
liver erythroid cells
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.98 0.60 4.4·10-30.38 1.49 -3.26 Concordant
RAD21_HUMAN 1.47 0.13 7.2·10-31.00 1.33 n/a n/a
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Adrenal_Gland Skin_Not_Sun_Exposed_Suprapubic

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