rs73143064 chr3:100941206 G>T
- Sequence
gcatttcatgatctctgctccagg[G/T]caagcagaacagcacgttccctct
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.30 | 1.25 | 1.87 | -1.89 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Small_Intestine_Terminal_Ileum