rs7314485 chr12:109996336 G>A
- Sequence
agctgcggcggcgctgacggcggc[G/A]cctctcccctcagcgccttgcagc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) CD14+ monocytes
- ASB for transcription factors
- NRF1_HUMAN ZN579_HUMAN STAT1_HUMAN ZNF24_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 0.94 | 2.43 | 2.04 | n/a | No Hit | |||
| ZN579_HUMAN | -2.49 | 2.24 | 1.50 | n/a | n/a | |||
| STAT1_HUMAN | 1.18 | 0.44 | 2.12 | n/a | No Hit | |||
| ZNF24_HUMAN | -0.26 | 1.36 | 1.89 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood