ADASTRA v1.6.10
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rs73166852
chr3:149224154
G
>
A
Sequence
tggtagttactcttctcatcaaaa[G/A]gcatgtggcaggaagtggggagaa
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
ELF1_HUMAN
IKZF2_HUMAN
IKZF1_HUMAN
FOXK2_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ELF1_HUMAN
2.65
-3.00
1.8·10
-5
1.00
1.33
n/a
No Hit
IKZF2_HUMAN
2.41
-2.32
3.4·10
-4
1.00
1.33
n/a
n/a
IKZF1_HUMAN
2.00
n/a
3.7·10
-3
1.00
1.33
n/a
No Hit
FOXK2_HUMAN
1.89
n/a
5.4·10
-3
1.00
1.33
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Brain_Cortex
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)