rs73190183 chr7:105522575 G>A
- Sequence
tcacgttgcaccgaccacgcagtt[G/A]acaataatggaaagagaatcactt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- NRF1_HUMAN KAISO_HUMAN FOXK2_HUMAN MNT_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -0.33 | 0.65 | 1.50 | n/a | No Hit | |||
| KAISO_HUMAN | 1.24 | -0.67 | 1.39 | n/a | No Hit | |||
| FOXK2_HUMAN | 1.30 | 0.42 | 1.46 | n/a | n/a | |||
| MNT_HUMAN | 1.21 | 0.34 | 1.46 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid