rs7324188 chr13:20476031 C>G
- Sequence
acggcagttccggggcaggtcctg[C/G]gcacgcggcaggaaggaaggaaac
- ASB in cell types
- GM12878 (female B-cells) ICN12 (primary pre-B acute lymphomablastic leukemia)
- ASB for transcription factors
- RUNX3_HUMAN IKZF1_HUMAN COT1_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RUNX3_HUMAN | 2.37 | n/a | 1.50 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.30 | 0.92 | 1.33 | n/a | No Hit | |||
| COT1_HUMAN | -1.91 | 1.84 | 1.33 | n/a | No Hit | |||
| BHE40_HUMAN | 1.33 | -1.60 | 1.33 | 1.83 | Weak Discordant | |||
| IKZF2_HUMAN | -0.93 | 1.06 | 1.33 | n/a | n/a |
Items per page:
1 – 5 of 5
Motif analysis
