ADASTRA v1.6.10
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adastra.autosome.org
rs732460
chr16:85645388
G
>
T
Sequence
ccgatctggctagacggagtgtct[G/T]ttgtggagctgccctatccagttg
ASB in cell types
HCT-116 (colon carcinoma)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HCT-116 (colon carcinoma)
1.18
-0.35
2.5·10
-4
0.99
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
prop taste detection threshold
GTEx eQTL
Esophagus_Mucosa
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale