ADASTRA v1.6.10
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rs732696
chr3:64187206
C
>
G
Sequence
cccaggttctagtcccaactctga[C/G]agctccgttgaaaacaagtttatt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
HEK293 (embryonic kidney)
breast tumor tissue
HEK293T (embryonic kidney)
ASB for transcription factors
ESR1_HUMAN
FOS_HUMAN
CREB1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN
2.00
0.59
8.4·10
-3
0.68
4.00
n/a
No Hit
FOS_HUMAN
n/a
3.12
1.00
0.02
6.00
n/a
n/a
CREB1_HUMAN
n/a
3.69
1.00
0.04
6.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL
Cells_Cultured_fibroblasts
,
Lung
,
Pancreas
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)