ADASTRA v1.6.10
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rs734454
chr19:3557787
A
>
C
Sequence
agcgcccgccgggtatgagggcga[A/C]ccccgagcgcgccgcaggagtggc
ASB in cell types
HepG2 (hepatoblastoma)
K562 (myelogenous leukemia)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma)
0.61
0.34
6.7·10
-4
0.75
1.26
K562 (myelogenous leukemia)
1.64
n/a
2.9·10
-3
1.00
2.00
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_EBV-transformed_lymphocytes
,
Esophagus_Mucosa
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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