rs736354 chr2:41736229 A>G
- Sequence
ttaaccacaattatcctacttcct[A/G]tattagtaacatgctaacgttatc
- ASB in cell types
- THP-1 (acute monocytic leukemia) GM12878 (female B-cells) CD14+ monocytes
- ASB for transcription factors
- VDR_HUMAN IKZF1_HUMAN IKZF2_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| VDR_HUMAN | n/a | 1.96 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.58 | -0.71 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.47 | -0.49 | 1.42 | n/a | n/a | |||
| STAT1_HUMAN | -2.48 | 1.84 | 2.50 | n/a | No Hit |
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