ADASTRA v1.6.10
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rs7364
chr1:113982039
C
>
A
Sequence
tcaacaaatttcaggctaaggatg[C/A]cccagacccagggctctaaccttg
ASB for transcription factors
GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN
n/a
1.76
1.00
0.04
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hypertension (early onset hypertension)
,
rheumatoid arthritis
,
years of education
GTEx eQTL
Breast_Mammary_Tissue
,
Colon_Transverse
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pituitary
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)