ADASTRA v1.6.10
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Soos
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adastra.autosome.org
rs737147
chr2:42788046
C
>
A
Sequence
ccaggcacctccctaccatgccta[C/A]ccctcagccactagctcctcctcc
ASB in cell types
GM12878 (female B-cells)
HEK293 (embryonic kidney)
ASB for transcription factors
ZFHX2_HUMAN
IKZF1_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFHX2_HUMAN
-2.66
2.48
1.00
6.8·10
-6
1.33
n/a
n/a
IKZF1_HUMAN
-0.86
1.31
1.00
0.04
1.33
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
college completion
,
fasting blood glucose
,
homa-b
,
triglycerides
GTEx eQTL
Breast_Mammary_Tissue
,
Colon_Transverse
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Pituitary
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)