rs737963 chr22:17228881 T>C
- Sequence
gtaagactgaggcctgcagcaact[T/C]gtgactcttgaagctatttgctcc
- ASB in cell types
- CD14+ monocytes ICN12 (primary pre-B acute lymphomablastic leukemia)
- ASB for transcription factors
- STAT1_HUMAN PBX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 2.82 | 2.50 | n/a | No Hit | |||
| PBX1_HUMAN | -1.38 | 1.55 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Whole_Blood