rs737986 chr22:20021188 G>T
- Sequence
tccgctagtggcccggccggcctg[G/T]gctcgggggctccgggctctgggc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- MNT_HUMAN E4F1_HUMAN EGR1_HUMAN ZN316_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | n/a | 2.77 | 4.00 | n/a | n/a | |||
| E4F1_HUMAN | n/a | 3.08 | 4.00 | n/a | n/a | |||
| EGR1_HUMAN | n/a | 2.38 | 4.00 | n/a | No Hit | |||
| ZN316_HUMAN | -4.15 | 2.20 | 4.00 | n/a | n/a | |||
| REQU_HUMAN | n/a | 2.07 | 4.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Spleen