rs73945617 chr18:839509 C>T
- Sequence
ctgtgcagcgtctgtggagctctg[C/T]gggcgccacctggtggtcaaaact
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) cranial neural crest cells Jurkat (T-cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN AP2A_HUMAN CREM_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.59 | 0.41 | 1.50 | n/a | No Hit | |||
| RAD21_HUMAN | 1.72 | 0.81 | 1.33 | n/a | n/a | |||
| AP2A_HUMAN | 2.66 | n/a | 2.00 | n/a | No Hit | |||
| CREM_HUMAN | 2.12 | -2.17 | 1.33 | n/a | No Hit | |||
| STAT1_HUMAN | 1.43 | -0.69 | 2.00 | n/a | No Hit |
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