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rs739468 chr9:133461126 T>G

Sequence
atgtctgtcgaggatgtctgcagg[T/G]tttaaacagtgcctgcctggcaga
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
ZFX_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFX_HUMAN -1.46 1.57 1.006.5·10-3 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP activated partial thromboplastin time coronary artery disease (cad) height hemoglobin (hb) ldl cholesterol mitral annular calcium red blood cell count (rbc) serum soluble e-selectin total cholesterol venous thromboembolism venous thrombosis
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Brain_Spinal_cord_cervical_c-1 Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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