ADASTRA v1.6.10
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rs740059
chr12:4562324
G
>
A
Sequence
ctcgtacttcacgagcagtcaggc[G/A]cgagtacgaggcaggcgacgaagc
ASB in cell types
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
ASB for transcription factors
LMBL2_HUMAN
ZN341_HUMAN
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
LMBL2_HUMAN
n/a
1.41
1.00
2.5·10
-9
2.00
n/a
n/a
ZN341_HUMAN
2.42
n/a
3.2·10
-3
1.00
2.00
n/a
No Hit
CTCF_HUMAN
0.84
0.77
0.03
0.70
1.27
n/a
No Hit
Items per page:
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Motif analysis
No data available
Genetic associations
GRASP
college completion
,
microalbuminuria
,
parkinsons disease
,
salmonella-induced pyroptosis
,
sporadic creutzfeldt-jakob disease
,
triglycerides
GTEx eQTL
Muscle_Skeletal
,
Nerve_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)