rs740355 chr12:1614062 A>G
- Sequence
tatgaccacctctttgtgcagtgg[A/G]tgctgggtaatgtagtccagcggt
- ASB in cell types
- SK-N-SH (neuroblastoma) GM12878 (female B-cells) Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- USF1_HUMAN ZN143_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| USF1_HUMAN | 1.73 | -0.24 | 1.50 | n/a | No Hit | |||
| ZN143_HUMAN | 1.13 | -1.16 | 1.33 | -3.55 | Concordant |
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Motif analysis
