rs7404095 chr16:23853269 T>C
- Sequence
cttgacagaagggagtttatttct[T/C]actcatgtcactaaccagtgcagg
- ASB in cell types
- GM12878 (female B-cells) macrophages
- ASB for transcription factors
- CEBPB_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | -3.27 | 2.03 | 2.50 | n/a | No Hit | |||
| SPI1_HUMAN | -2.44 | 1.54 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
EMBL-EBI chronic inflammatory diseases (ankylosing spondylitis, crohns disease, psoriasis, primary sclerosing cholangitis, ulcerative colitis) (pleiotropy), inflammatory bowel disease, ulcerative colitis
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Muscularis, Nerve_Tibial, Thyroid, Whole_Blood