rs740532 chr7:7182351 G>A
- Sequence
ggatcagaaatgcggagagtagca[G/A]acacaagccgcaagggggatacaa
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) HepG2 (hepatoblastoma) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN JUN_HUMAN BCL3_HUMAN KMT2A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.08 | 0.32 | 1.83 | n/a | No Hit | |||
| JUN_HUMAN | 1.17 | -0.62 | 2.00 | n/a | No Hit | |||
| BCL3_HUMAN | 1.17 | -0.48 | 2.00 | n/a | n/a | |||
| KMT2A_HUMAN | 1.50 | -1.19 | 1.00 | n/a | n/a | |||
| MNT_HUMAN | 0.51 | 1.88 | 1.73 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood