rs740534 chr7:7181796 G>C
- Sequence
tggaacgtggtcttgtagataatg[G/C]ttaacgccagtaaagactaaacct
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXK2_HUMAN KDM1A_HUMAN CTCF_HUMAN ELF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.61 | -1.49 | 1.33 | n/a | n/a | |||
| KDM1A_HUMAN | -0.99 | 1.78 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.58 | 0.39 | 1.49 | n/a | No Hit | |||
| ELF4_HUMAN | -3.09 | 2.26 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid, Whole_Blood