rs74198813 chr16:57569838 G>A
- Sequence
tatcatcatcattacctcctccac[G/A]tctatcatcaccgtcacctcctcc
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- CREB1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 0.79 | 2.26 | 3.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.90 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Esophagus_Muscularis, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic