rs742472 chr1:167645508 G>A
- Sequence
aagcaacaagaccacgaggctggg[G/A]aatttcacagagaaagaacattct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TAL1_HUMAN REQU_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | 2.19 | n/a | 3.00 | n/a | No Hit | |||
| REQU_HUMAN | 1.92 | -3.41 | 2.75 | n/a | n/a | |||
| NFIC_HUMAN | 2.44 | n/a | 3.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Thyroid