rs74295142 chr5:159212831 G>A
- Sequence
cagaacatttcatcataacctccc[G/A]ccggggaaaaaaaaacccatatcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TIF1A_HUMAN ATF3_HUMAN MEIS2_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TIF1A_HUMAN | 2.25 | -2.54 | 2.00 | n/a | n/a | |||
| ATF3_HUMAN | 2.12 | -2.16 | 2.00 | n/a | No Hit | |||
| MEIS2_HUMAN | 2.29 | -3.03 | 2.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.98 | -1.66 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg