ADASTRA v1.6.10
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rs74471685
chr16:57186428
C
>
G
Sequence
gccgccgccgccgccccctccctc[C/G]ggtgggcccgggaggtagagaaag
ASB in cell types
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.82
0.19
2.8·10
-5
1.00
1.82
HEK293T (embryonic kidney)
-0.55
1.20
1.00
7.3·10
-5
2.00
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Cerebellum
,
Colon_Transverse
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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