rs745582 chr19:13163178 G>C
- Sequence
cccctttccggacccgccctgccc[G/C]ccccagggaggcgggggcggagct
- ASB in cell types
- CD14+ monocytes cranial neural crest cells
- ASB for transcription factors
- STAT1_HUMAN AP2A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.12 | n/a | 2.50 | n/a | No Hit | |||
| AP2A_HUMAN | 2.41 | n/a | 2.00 | -0.40 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial