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rs745666 chr17:74748659 G>C

Sequence
gcgcggggcggggattggtctgtg[G/C]tcctctctcggctcctcgcggctc
ASB in cell types
HepG2 (hepatoblastoma) K562 (myelogenous leukemia) keratinocytes A549 (lung carcinoma)
ASB for transcription factors
SNAI2_HUMAN BCL3_HUMAN JUN_HUMAN KMT2A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN n/a 3.07 1.002.9·10-9 1.50 n/a No Hit
BCL3_HUMAN -0.54 1.48 0.881.4·10-3 3.00 n/a n/a
JUN_HUMAN -0.79 1.28 1.005.2·10-3 3.00 n/a No Hit
KMT2A_HUMAN 0.20 2.04 1.009.1·10-3 1.39 n/a n/a
MNT_HUMAN -0.09 1.33 0.860.05 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP prop taste detection threshold
GTEx eQTL Artery_Aorta Brain_Hypothalamus Cells_Cultured_fibroblasts Esophagus_Muscularis Testis Whole_Blood

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