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rs745870 chr11:76316892 T>G

Sequence
gcaagttgaggacactcccatcat[T/G]ggtacagtgacctagaatcctgag
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) liver
ASB for transcription factors
ESR1_HUMAN HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN -0.63 2.01 1.001.0·10-5 1.69 2.37 Concordant
HNF4A_HUMAN -1.47 1.28 1.000.05 1.33 n/a No Hit
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Motif analysis

ESR1_HUMAN Concordant
ESR1_HUMAN pic

Genetic associations

GRASP amyotrophic lateral sclerosis (als) age of onset hdl cholesterol parkinsons disease variant creutzfeldt-jakob disease
GTEx eQTL Lung Thyroid

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