rs749283 chr12:109760760 G>A
- Sequence
gcaaggccatgagggtttggcaca[G/A]tgcctggcctggagggaacagtca
- ASB in cell types
- liver breast tumor tissue
- ASB for transcription factors
- ESR1_HUMAN SP1_HUMAN HNF4A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | n/a | 2.53 | 2.50 | n/a | No Hit | |||
| SP1_HUMAN | n/a | 1.85 | 1.33 | -1.89 | Weak Discordant | |||
| HNF4A_HUMAN | n/a | 1.51 | 1.33 | n/a | No Hit |
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Motif analysis
