ADASTRA v1.6.10
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rs749681
chr16:88504267
T
>
C
Sequence
acagataaggtaaagaaaatatgt[T/C]ctgtgcaaacagcttatctgacat
ASB in cell types
HepG2 (hepatoblastoma)
MCF7 (Invasive ductal breast carcinoma)
CD34+ bone marrow cell-derived erythroid progenitors
ASB for transcription factors
ESR1_HUMAN
GATA1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN
n/a
1.83
1.00
2.1·10
-3
3.50
n/a
No Hit
GATA1_HUMAN
1.74
-1.53
8.6·10
-3
1.00
1.33
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
bipolar disorder in alcoholics
,
chronic kidney disease
,
comorbid depressive syndrome and alcohol dependence
,
diastolic blood pressure (dbp)
,
ldl cholesterol change with statins
,
lp-pla2 mass
GTEx eQTL
Muscle_Skeletal
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)