Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs749773 chr2:165877228 T>C

Sequence
atatgaaataagaagtgtaaatag[T/C]gctcttcagctctaataaaagtac
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.92 0.99 1.3·10-31.00 1.82 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP irritible bowel syndrome obesity with early age of onset (age >2) schizophrenia total cholesterol
GTEx eQTL Adipose_Subcutaneous Brain_Cerebellum Heart_Left_Ventricle Nerve_Tibial Pancreas Skin_Sun_Exposed_Lower_leg Stomach Testis

Download