rs75112244 chr19:53431544 T>C
- Sequence
ggtcgcccctggctggcctgagca[T/C]tccgtcccgcatcccagggggagg
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN394_HUMAN OSR2_HUMAN GLIS2_HUMAN ZN189_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN394_HUMAN | 2.07 | -2.11 | 1.33 | n/a | No Hit | |||
| OSR2_HUMAN | 2.10 | n/a | 1.50 | n/a | No Hit | |||
| GLIS2_HUMAN | 1.94 | n/a | 1.33 | n/a | n/a | |||
| ZN189_HUMAN | 2.03 | -1.84 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Brain_Cerebellar_Hemisphere, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid