rs751152 chr19:55462050 T>C
- Sequence
gagagggcgtctcggccggcccca[T/C]tgcacagagcagaccgccgaggcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARI1B_HUMAN ZBT7A_HUMAN NRF1_HUMAN EGR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | n/a | 2.35 | 2.00 | n/a | n/a | |||
| ZBT7A_HUMAN | -0.11 | 1.26 | 2.00 | n/a | No Hit | |||
| NRF1_HUMAN | -1.91 | 1.83 | 2.00 | n/a | No Hit | |||
| EGR1_HUMAN | -1.04 | 1.35 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial