ADASTRA v1.6.10
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rs7512010
chr1:234975303
T
>
A
Sequence
atgttcgtgtagattaccttccag[T/A]tcactgcatggtagctcttgggat
ASB in cell types
HEK293 (embryonic kidney)
CD34+ hematopoietic stem cells-derived proerythroblasts
primary endothelial colony-forming cells
MDA-MB-453 (breast adenocarcinoma)
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(+2 others)
ASB for transcription factors
GATA1_HUMAN
TAL1_HUMAN
STAT1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN
1.86
-0.18
2.2·10
-4
1.00
1.83
n/a
No Hit
TAL1_HUMAN
1.50
-0.25
0.01
1.00
1.33
n/a
No Hit
STAT1_HUMAN
1.16
n/a
0.04
1.00
2.50
n/a
No Hit
Items per page:
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Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
homa-ir
,
lp-pla2 mass
,
total cholesterol
GTEx eQTL
Colon_Transverse
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)