ADASTRA v1.6.10
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rs751878
chr5:98827240
T
>
G
Sequence
agatatcaacttaaactgttaaat[T/G]ggattcataatttttgaaattatt
ASB in cell types
K562 (myelogenous leukemia)
foreskin keratinocyte
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.57
-0.05
0.02
0.84
2.00
foreskin keratinocyte
0.50
n/a
0.05
1.00
2.50
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Cortex
,
Brain_Hippocampus
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Breast_Mammary_Tissue
,
Colon_Sigmoid
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Liver
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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