rs7520844 chr1:24727732 C>G
- Sequence
tgggttggcctcggggacgatgat[C/G]taagacagctggagtgtcttcctg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- ATF3_HUMAN ATF7_HUMAN ATF4_HUMAN CEBPG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 3.14 | 1.33 | 5.41 | Concordant | |||
| ATF7_HUMAN | -2.10 | 2.17 | 1.33 | n/a | n/a | |||
| ATF4_HUMAN | -2.45 | 2.50 | 1.33 | 3.92 | Concordant | |||
| CEBPG_HUMAN | -2.42 | 2.47 | 1.33 | 4.82 | Concordant | |||
| CEBPB_HUMAN | n/a | 2.22 | 1.33 | n/a | No Hit |
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Motif analysis
