rs7522774 chr1:246139979 T>C
- Sequence
atatttcactctgcaatgacacag[T/C]tctccctttcatcaagatattctt
- ASB in cell types
- SK-N-SH (neuroblastoma) HCT-116 (colon carcinoma) GM23248
- ASB for transcription factors
- GATA3_HUMAN PBX3_HUMAN HTF4_HUMAN EZH2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | 1.63 | -1.45 | 1.33 | n/a | No Hit | |||
| PBX3_HUMAN | 1.31 | -1.03 | 1.33 | n/a | No Hit | |||
| HTF4_HUMAN | 1.79 | -1.47 | 1.33 | n/a | No Hit | |||
| EZH2_HUMAN | 1.78 | n/a | 1.50 | n/a | n/a |
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