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rs752371 chr17:4739520 C>T

Sequence
gccctgctgtgccccgaccgtgcg[C/T]tcagtactcggcccgcgccatgcc
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN ZFHX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 1.28 -3.28 0.011.00 2.50 n/a No Hit
ZFHX2_HUMAN 1.86 -2.14 0.021.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Muscularis Heart_Left_Ventricle Lung Nerve_Tibial Ovary Pancreas Thyroid Whole_Blood

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