rs75252567 chr19:6460244 T>C
- Sequence
acagaagatccaggagcgatgctc[T/C]cccactgtcccttcttcccgcccg
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN MNT_HUMAN NRF1_HUMAN NFIC_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.85 | n/a | 2.50 | n/a | No Hit | |||
| MNT_HUMAN | -0.36 | 1.69 | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | -0.62 | 1.78 | 2.00 | n/a | No Hit | |||
| NFIC_HUMAN | -3.17 | 2.26 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Whole_Blood