rs75277599 chr2:236693223 C>T
- Sequence
agaaggacggcagagctgtgtggg[C/T]gagggagccctgactttctggaaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN GRHL2_HUMAN PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.68 | 2.39 | 2.35 | 2.33 | Concordant | |||
| GRHL2_HUMAN | -0.85 | 1.19 | 1.75 | n/a | No Hit | |||
| PRGR_HUMAN | -3.21 | 1.66 | 2.50 | n/a | No Hit |
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Motif analysis
