rs7527878 chr1:228739540 T>G
- Sequence
tcgcgtcactgccctgcagcctgg[T/G]tgacagagagagattccatctcaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GATA3_HUMAN ESR1_HUMAN NCOA3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 3.26 | -3.50 | 2.33 | n/a | No Hit | |||
| GATA3_HUMAN | 1.00 | n/a | 1.50 | n/a | No Hit | |||
| ESR1_HUMAN | 1.38 | -0.39 | 2.09 | n/a | No Hit | |||
| NCOA3_HUMAN | 2.17 | -3.04 | 1.50 | n/a | n/a |
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