rs7528491 chr1:94464026 T>A
- Sequence
ttaaataatcacatggcttttttt[T/A]atttatgtctaagcttaaatgtca
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.04 | 0.62 | 1.80 | |||
| VCaP (prostate carcinoma) | n/a | 2.10 | 2.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Whole_Blood