rs753271 chr10:79093818 A>G
- Sequence
tctctctgggccatccctgccgca[A/G]gcactctgcagacagacagtcttc
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ hematopoietic stem cells-derived proerythroblasts SKH1 (chronic myelogenous leukemia, BCR-ABL1 positive) periferal blood macrophages
- ASB for transcription factors
- NRF1_HUMAN ZN316_HUMAN GATA1_HUMAN RUNX1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -2.05 | 2.05 | 1.17 | 1.23 | Weak Concordant | |||
| ZN316_HUMAN | 3.42 | -1.38 | 1.33 | n/a | n/a | |||
| GATA1_HUMAN | 2.13 | 0.25 | 1.67 | n/a | No Hit | |||
| RUNX1_HUMAN | -0.97 | 1.20 | 1.50 | n/a | No Hit | |||
| GATA2_HUMAN | -0.48 | 1.54 | 1.50 | n/a | No Hit |
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Motif analysis
