rs753513 chr17:3890178 C>T
- Sequence
cgagtatctggatggccctggcaa[C/T]gggtgccctccgcagctcccgccc
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- JUN_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.52 | -0.68 | 2.65 | n/a | No Hit | |||
| GCR_HUMAN | 1.66 | -0.47 | 2.70 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Nerve_Tibial