rs75428119 chr2:10408089 C>A
- Sequence
tgcagggacagccacccacacatt[C/A]ctcttcctgtcgcagtagcagctt
- ASB in cell types
- BEAS-2B (bronchial epithelium) DU145 (prostate carcinoma)
- ASB for transcription factors
- GCR_HUMAN ANDR_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.13 | -0.86 | 1.33 | n/a | No Hit | |||
| ANDR_HUMAN | 1.47 | -1.35 | 1.50 | n/a | No Hit | |||
| EGR1_HUMAN | 1.56 | 0.22 | 1.33 | -2.45 | Concordant |
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Motif analysis
