rs7543531 chr1:7012666 C>T
- Sequence
ctgattgcccctctctgtgacgca[C/T]ttccttcccttcgtgccacctcac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- GABP1_HUMAN ZBT40_HUMAN E2F1_HUMAN ATF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABP1_HUMAN | 1.19 | n/a | 1.33 | n/a | n/a | |||
| ZBT40_HUMAN | 2.45 | n/a | 1.33 | n/a | n/a | |||
| E2F1_HUMAN | 0.94 | n/a | 1.33 | 0.10 | Weak Discordant | |||
| ATF1_HUMAN | 1.53 | -1.82 | 1.33 | 0.75 | Weak Discordant | |||
| EMSY_HUMAN | 2.28 | -2.51 | 1.33 | n/a | n/a |
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Motif analysis
