rs7543742 chr1:207500635 G>A
- Sequence
aaagattgaccgagccaagtgttg[G/A]cgataaggtggagtaactggaatt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- SOX6_HUMAN MTG16_HUMAN SMCA4_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX6_HUMAN | n/a | 3.35 | 2.50 | n/a | n/a | |||
| MTG16_HUMAN | n/a | 3.41 | 3.00 | n/a | n/a | |||
| SMCA4_HUMAN | n/a | 3.13 | 2.50 | n/a | n/a | |||
| HDAC1_HUMAN | -1.60 | 2.27 | 2.67 | n/a | n/a | |||
| RING2_HUMAN | n/a | 3.22 | 2.50 | n/a | n/a |
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