rs754553 chr7:24719233 C>T
- Sequence
atttattgttctgaaaaagaaaaa[C/T]ggatgtgagtggcttagtgcctca
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- SKIL_HUMAN REQU_HUMAN COT1_HUMAN MYB_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SKIL_HUMAN | 2.45 | n/a | 1.33 | n/a | n/a | |||
| REQU_HUMAN | 2.33 | n/a | 1.33 | n/a | n/a | |||
| COT1_HUMAN | 1.83 | n/a | 1.33 | n/a | No Hit | |||
| MYB_HUMAN | 1.52 | n/a | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Muscle_Skeletal, Ovary, Spleen, Uterus, Vagina