ADASTRA v1.6.10
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rs754559
chr9:96450627
G
>
C
Sequence
ccccgggggcggcctgcaggcgcc[G/C]ggtacgcggggacagcggggttag
ASB in cell types
cranial neural crest cells
ASB for transcription factors
AP2A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
AP2A_HUMAN
1.90
-3.82
0.02
1.00
2.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
prop taste detection threshold
,
sarcoidosis
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Cells_EBV-transformed_lymphocytes
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)