rs7547048 chr1:114511320 T>G
- Sequence
tcccgagggaggcgggaactcggt[T/G]cgcgggcgcggagcggtcccggac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells) CD14+ monocytes HCC1954 (ductal breast carcinoma)
- ASB for transcription factors
- NRF1_HUMAN STAT1_HUMAN RB_HUMAN HIF1A_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -1.42 | 1.48 | 2.00 | 7.12 | Concordant | |||
| STAT1_HUMAN | 1.95 | n/a | 2.50 | n/a | No Hit | |||
| RB_HUMAN | 2.72 | -0.90 | 1.33 | n/a | n/a | |||
| HIF1A_HUMAN | 2.14 | -1.70 | 2.00 | n/a | No Hit |
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Motif analysis
